Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene24041 biogeco3 v1.0 343
AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene24042 biogeco3 v1.0 339
AutoFact: vacuolar protein sorting-associated protein VTA1 [Arabidopsis thaliana] emb|CAB36521.1| putative protein [Arabidopsis thaliana] emb|CAB79530.1| putative protein [Arabidopsis thaliana] gb|AAK82482.1| AT4g26750/F10M23_90 [Arabidopsis thaliana] gb|AAM16165.1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene24049 biogeco3 v1.0 222
AutoFact: DNA repair protein radA (radA)-like [Oryza sativa Japonica Group] dbj|BAD45123.1| DNA repair protein radA (radA)-like [Oryza sativa Japonica Group] dbj|BAG91035.1| unnamed protein product [Oryza sativa Japonica Group] 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein rad51-like protein 4.00921e-34
Internal
biog3_v1.0_unigene24050 biogeco3 v1.0 179
AutoFact: WRKY transcription factor NtEIG-D48 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 11 0.0
Internal
biog3_v1.0_unigene24055 biogeco3 v1.0 245
AutoFact: Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SGD6_RICCO 0.0
Blast2go: cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 0.0
Putative coding
biog3_v1.0_unigene24069 biogeco3 v1.0 333
AutoFact: 5'-3' exonuclease family protein n=4 Tax=Arabidopsis RepID=Q94A33_ARATH 1.0e-32
FL-Next: sp=Exonuclease 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 4.29358e-42
Internal
biog3_v1.0_unigene24090 biogeco3 v1.0 384
AutoFact: Os01g0872800 protein n=2 Tax=Oryza sativa RepID=Q8RUE8_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-phosphoinositide-dependent protein kinase-1 pdk1 0.0
C-terminus
biog3_v1.0_unigene24110 biogeco3 v1.0 252
AutoFact: putative inactive receptor kinase [Arabidopsis thaliana] sp|O48788.1|Y2267_ARATH RecName: Full=Probable inactive receptor kinase At2g26730; Flags: Precursor gb|AAB95307.1| putative receptor-like protein kinase [Arabidopsis thaliana] gb|AAX22262.1| At2g267 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
unknown
biog3_v1.0_unigene24120 biogeco3 v1.0 207
AutoFact: Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis thaliana] sp|Q8H0T9.3|KTNB1_ARATH RecName: Full=Katanin p80 WD40 repeat-containing subunit B1 homolog 1 gb|AAN72064.1| putative protein [Arabidopsis thaliana] gb|AED93166.1| Katanin p80 WD40 rep 0.0
FL-Next: Isoform 2 of Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430 0.0
Blast2go: katanin p80 wd40 repeat-containing subunit b1 homolog 1-like 0.0
N-terminus
biog3_v1.0_unigene24137 biogeco3 v1.0 331
AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
Blast2go: two-component response regulator-like aprr1-like 0.0
unknown
biog3_v1.0_unigene24151 biogeco3 v1.0 293
AutoFact: ROOT HAIRLESS 1 [Arabidopsis thaliana] 0.0
Blast2go: root hairless 1 0.0
unknown
biog3_v1.0_unigene24171 biogeco3 v1.0 236
AutoFact: Polyketide_cyc2 domain containing protein 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl8 0.0
C-terminus
biog3_v1.0_unigene24182 biogeco3 v1.0 286
AutoFact: Herpes_gp2 multi-domain protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene24192 biogeco3 v1.0 248
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
Blast2go: arginine serine-rich-splicing factor rsp40 0.0
unknown
biog3_v1.0_unigene24242 biogeco3 v1.0 488
AutoFact: Receptor-like kinase (Fragment) n=1 Tax=Marchantia polymorpha RepID=A7VM26_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene24244 biogeco3 v1.0 348
AutoFact: LisH domain containing protein 4.0e-05
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ddb1- and cul4-associated factor homolog 1-like 0.0
Internal
biog3_v1.0_unigene24262 biogeco3 v1.0 284
AutoFact: CBL-interacting protein kinase 03 n=2 Tax=Selaginella moellendorffii RepID=C4P7R5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene24276 biogeco3 v1.0 314
AutoFact: Os06g0140800 protein n=3 Tax=Oryza sativa RepID=Q0DEQ5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u-box domain-containing protein 0.0
Internal
biog3_v1.0_unigene24278 biogeco3 v1.0 136
AutoFact: Calcineurin B-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZGA7_PICSI 0.0
Blast2go: calcineurin b-like protein 0.0
unknown
biog3_v1.0_unigene24279 biogeco3 v1.0 196
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 1.0e-30
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swr1 complex snf2 family dna-dependent atpase 2.22626e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain