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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene23624 biogeco3 v1.0 321
AutoFact: putative cinnamyl alcohol dehydrogenase 1 [Arabidopsis thaliana] sp|Q9CAI3.1|CADH1_ARATH RecName: Full=Probable cinnamyl alcohol dehydrogenase 1; Short=AtCAD1 gb|AAG51850.1|AC010926_13 putative cinnamyl-alcohol dehydrogenase; 49641-51171 [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamyl alcohol dehydrogenase 0.0
N-terminus
biog3_v1.0_unigene23670 biogeco3 v1.0 325
AutoFact: zinc transporter ZIP6 [Arabidopsis halleri subsp. halleri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zip transporter 0.0
Putative N-terminus
biog3_v1.0_unigene23672 biogeco3 v1.0 285
AutoFact: RNA export 1 [Nicotiana benthamiana] 0.0
Blast2go: rae1-like protein 0.0
unknown
biog3_v1.0_unigene23705 biogeco3 v1.0 240
AutoFact: chloroplast inner envelope protein, 110 kD (IEP110) [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23716 biogeco3 v1.0 241
AutoFact: DNA ligase n=1 Tax=Populus trichocarpa RepID=B9IN68_POPTR 7.0e-26
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 5.58879e-30
Internal
biog3_v1.0_unigene23733 biogeco3 v1.0 236
AutoFact: AP-2 complex subunit alpha, putative; K11824 AP-2 complex subunit alpha 0.0
FL-Next: Isoform 3 of AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana GN=ALPHA-ADR 0.0
Blast2go: ap-2 complex subunit alpha-1 0.0
Internal
biog3_v1.0_unigene23736 biogeco3 v1.0 313
AutoFact: amyloid beta precursor protein binding protein 1 [Arabidopsis thaliana] sp|P42744.1|ULA1_ARATH RecName: Full=NEDD8-activating enzyme E1 regulatory subunit; AltName: Full=Auxin-resistance protein AXR1 gb|AAB59348.1| ubiquitin-activating enzyme E1 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nedd8-activating enzyme e1 regulatory subunit 0.0
Putative N-terminus
biog3_v1.0_unigene23787 biogeco3 v1.0 356
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5V6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor-like serine threonine-protein kinase ale2-like 0.0
Internal
biog3_v1.0_unigene23807 biogeco3 v1.0 365
AutoFact: Zinc finger-homeodomain protein 2 n=1 Tax=Saruma henryi RepID=B0LK13_SARHE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zf-hd homeobox protein at4g24660-like 0.0
N-terminus
biog3_v1.0_unigene23849 biogeco3 v1.0 270
AutoFact: replication licensing factor MCM7 homologue [Zea mays] emb|CAC44902.1| replication licensing factor MCM7 homologue [Zea mays] 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein prolifera 0.0
Internal
biog3_v1.0_unigene23859 biogeco3 v1.0 282
AutoFact: BTB/POZ and M4 domain-containing protein [Arabidopsis thaliana] sp|Q9SRV1.1|BPM4_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 4; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 4; Short=AtBPM4 gb|AAF00643.1|AC009540_20 unknown protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz protein 0.0
Putative C-terminus
biog3_v1.0_unigene23885 biogeco3 v1.0 319
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T4Z1_RICCO 0.0
FL-Next: sp=G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23943 biogeco3 v1.0 137
AutoFact: AGO1-2 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q2LFC3_NICBE 0.0
Blast2go: protein argonaute 0.0
unknown
biog3_v1.0_unigene23958 biogeco3 v1.0 462
AutoFact: nuclear pore complex protein-like protein [Arabidopsis thaliana] dbj|BAB09662.1| unnamed protein product [Arabidopsis thaliana] gb|AED90908.1| nuclear pore complex protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nuclear pore complex protein 0.0
Internal
biog3_v1.0_unigene23959 biogeco3 v1.0 288
AutoFact: Membrane acyl-CoA binding protein n=1 Tax=Agave americana RepID=Q4L0H4_AGAAM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl- binding protein 0.0
Putative N-terminus
biog3_v1.0_unigene23975 biogeco3 v1.0 300
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: dna damage-binding protein 1a 0.0
Internal
biog3_v1.0_unigene23994 biogeco3 v1.0 434
AutoFact: CBL-interacting protein kinase 09 n=2 Tax=Vitis vinifera RepID=A5BZV3_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cbl-interacting serine threonine-protein 0.0
N-terminus
biog3_v1.0_unigene23995 biogeco3 v1.0 194
AutoFact: protein RIK [Zea mays] sp|Q32SG5.1|RIK_MAIZE RecName: Full=Protein RIK; AltName: Full=Rough sheath 2-interacting KH domain protein; Short=RS2-interacting KH domain protein gb|AAY24682.1| ROUGH SHEATH2-interacting KH-domain protein [Zea mays] 0.0
FL-Next: sp=Protein RIK; Zea mays (Maize). 0.0
Blast2go: protein rik-like 0.0
Internal
biog3_v1.0_unigene24014 biogeco3 v1.0 304
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9T5V5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pfkb-like carbohydrate kinase family protein 0.0
N-terminus
biog3_v1.0_unigene24028 biogeco3 v1.0 133
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp40-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain