Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1685 biogeco3 v1.0 387
AutoFact: Kinesin-like protein NACK1 n=1 Tax=Nicotiana tabacum RepID=Q8S950_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: kinesin-like protein 0.0
Internal
biog3_v1.0_unigene1689 biogeco3 v1.0 388
AutoFact: Ku70 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku70 0.0
Internal
biog3_v1.0_unigene1722 biogeco3 v1.0 502
AutoFact: Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis thaliana] sp|Q8H0T9.3|KTNB1_ARATH RecName: Full=Katanin p80 WD40 repeat-containing subunit B1 homolog 1 gb|AAN72064.1| putative protein [Arabidopsis thaliana] gb|AED93166.1| Katanin p80 WD40 rep 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: katanin p80 wd40 repeat-containing subunit b1 homolog 1-like 0.0
Putative Complete
biog3_v1.0_unigene1746 biogeco3 v1.0 587
AutoFact: MA3 domain-containing protein [Arabidopsis thaliana] ref|NP_001031708.1| MA3 domain-containing protein [Arabidopsis thaliana] ref|NP_001190828.1| MA3 domain-containing protein [Arabidopsis thaliana] gb|AAL32978.1| AT4g24800/F6I7_10 [Arabidopsis thaliana] 0.0
FL-Next: sp=Eukaryotic initiation factor iso-4F subunit p82-34; Triticum aestivum (Wheat). 0.0
Blast2go: ma3 domain-containing protein 0.0
Putative C-terminus
biog3_v1.0_unigene1816 biogeco3 v1.0 574
AutoFact: Fk506 binding protein, putative n=1 Tax=Ricinus communis RepID=B9SQB6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: peptidyl-prolyl isomerase pasticcino1 0.0
C-terminus
biog3_v1.0_unigene1848 biogeco3 v1.0 625
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 71a26-like 0.0
Internal
biog3_v1.0_unigene1868 biogeco3 v1.0 707
AutoFact: pfam01425, Amidase, Amidase 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amidase family protein 0.0
Internal
biog3_v1.0_unigene1870 biogeco3 v1.0 976
AutoFact: DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana] gb|AAK48978.1|AF370551_1 RNA polymerase I, II and III 24.3 kDa subunit [Arabidopsis thaliana] gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5 [Arabidopsis thaliana] gb|AAC28253.1| RNA polymerase I 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii subunit rpabc1 0.0
Complete
biog3_v1.0_unigene1874 biogeco3 v1.0 441
AutoFact: putative E3 ubiquitin-protein ligase XBAT31 [Arabidopsis thaliana] sp|Q94B55.1|XB31_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase XBAT31; AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBAT31; AltName: Full=Protein XB3 h 0.0
Blast2go: e3 ubiquitin-protein ligase xbat31-like 0.0
unknown
biog3_v1.0_unigene1875 biogeco3 v1.0 371
AutoFact: Anaphase-promoting complex subunit 11 n=8 Tax=Magnoliophyta RepID=APC11_ARATH 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: anaphase-promoting complex subunit 11 0.0
N-terminus
biog3_v1.0_unigene1880 biogeco3 v1.0 448
AutoFact: Calcineurin B-like protein 03 n=12 Tax=Magnoliophyta RepID=A5AHA7_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcineurin b-like protein 0.0
C-terminus
biog3_v1.0_unigene1897 biogeco3 v1.0 322
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Internal
biog3_v1.0_unigene1969 biogeco3 v1.0 403
AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9SEM0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Internal
biog3_v1.0_unigene2017 biogeco3 v1.0 1569
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
Putative Complete
biog3_v1.0_unigene2037 biogeco3 v1.0 802
AutoFact: Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis thaliana] sp|Q8H0T9.3|KTNB1_ARATH RecName: Full=Katanin p80 WD40 repeat-containing subunit B1 homolog 1 gb|AAN72064.1| putative protein [Arabidopsis thaliana] gb|AED93166.1| Katanin p80 WD40 rep 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: katanin p80 wd40 repeat-containing subunit b1 homolog 1-like 0.0
Putative N-terminus
biog3_v1.0_unigene2045 biogeco3 v1.0 680
AutoFact: cell division cycle protein 27-B [Arabidopsis thaliana] sp|Q8LGU6.1|CD27B_ARATH RecName: Full=Cell division cycle protein 27 homolog B; Short=CDC27 homolog B; AltName: Full=Protein HOBBIT emb|CAD31951.1| HOBBIT protein [Arabidopsis thaliana] gb|AEC06953.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle protein 27 homolog b-like 0.0
Internal
biog3_v1.0_unigene2091 biogeco3 v1.0 1785
AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RE67_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ruvb-like 1-like 0.0
Putative Complete
biog3_v1.0_unigene2112 biogeco3 v1.0 608
AutoFact: Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis thaliana] sp|Q8H0T9.3|KTNB1_ARATH RecName: Full=Katanin p80 WD40 repeat-containing subunit B1 homolog 1 gb|AAN72064.1| putative protein [Arabidopsis thaliana] gb|AED93166.1| Katanin p80 WD40 rep 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: katanin p80 wd40 repeat-containing subunit b1 homolog 1-like 0.0
Internal
biog3_v1.0_unigene2145 biogeco3 v1.0 459
AutoFact: Nuclear pore complex protein nup93, putative n=1 Tax=Ricinus communis RepID=B9S1E0_RICCO 0.0
FL-Next: sp=Uncharacterized protein At2g41620; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein at2g41620-like 0.0
Internal
biog3_v1.0_unigene2176 biogeco3 v1.0 223
AutoFact: zinc finger protein 330 variant [Homo sapiens] 0.0
Blast2go: zinc finger protein 330 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain