Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene23253 biogeco3 v1.0 220
AutoFact: Putative peroxidase n=1 Tax=Solanum tuberosum RepID=Q948Z3_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxidase 73 0.0
N-terminus
biog3_v1.0_unigene23262 biogeco3 v1.0 262
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 2 0.0
Internal
biog3_v1.0_unigene23263 biogeco3 v1.0 233
AutoFact: Phytochelatins synthase n=1 Tax=Allium sativum RepID=Q8GZS8_ALLSA 0.0
FL-Next: sp=Glutathione gamma-glutamylcysteinyltransferase 1; Triticum aestivum (Wheat). 0.0
Blast2go: phytochelatin synthase 0.0
Internal
biog3_v1.0_unigene23283 biogeco3 v1.0 223
AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
FL-Next: sp=Two-component response regulator-like PRR1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: two-component response regulator-like aprr1-like 0.0
Putative N-terminus
biog3_v1.0_unigene23289 biogeco3 v1.0 228
AutoFact: pfam01425, Amidase, Amidase 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amidase family protein 0.0
Internal
biog3_v1.0_unigene23308 biogeco3 v1.0 297
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor subunit 3-i 0.0
Internal
biog3_v1.0_unigene23314 biogeco3 v1.0 297
AutoFact: Phospholipase D (Fragment) n=2 Tax=Vitis vinifera RepID=D7TW92_VITVI 0.0
FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phospholipase d 0.0
Putative C-terminus
biog3_v1.0_unigene23326 biogeco3 v1.0 307
AutoFact: lectin protein kinase-like protein [Arabidopsis thaliana] sp|Q9XID3.1|Y1343_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; Flags: Precursor gb|AAD39605.1|AC007454_4 Contains similarity to gi|479356 protein kin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23363 biogeco3 v1.0 328
AutoFact: SNF1-related protein kinase [Cucumis sativus] 0.0
Blast2go: snf1-related protein kinase catalytic subunit alpha kin10 0.0
unknown
biog3_v1.0_unigene23372 biogeco3 v1.0 413
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8B0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Internal
biog3_v1.0_unigene23377 biogeco3 v1.0 280
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK44037.1|AF370222_1 unknown protein [Arabidopsis thaliana] gb|AAL15222.1| unknown protein [Arabidopsis thaliana] gb|AEE34229.1| transducin/WD-40 repeat-containing protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleoporin seh1-like 0.0
N-terminus
biog3_v1.0_unigene23379 biogeco3 v1.0 251
AutoFact: vacuolar protein sorting-associated protein 45-like protein [Arabidopsis thaliana] sp|O49048.2|VPS45_ARATH RecName: Full=Vacuolar protein sorting-associated protein 45 homolog; Short=AtVPS45 gb|AAC34344.1| AtVPS45p [Arabidopsis thaliana] gb|AAK91388.1| At 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 45 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vacuolar protein sorting-associated protein 45 homolog 0.0
N-terminus
biog3_v1.0_unigene23401 biogeco3 v1.0 314
AutoFact: Os06g0558700 protein n=5 Tax=Oryza sativa RepID=C7J4C8_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear poly polymerase 0.0
Internal
biog3_v1.0_unigene23508 biogeco3 v1.0 377
AutoFact: cyclin-dependent kinase F-1 [Arabidopsis thaliana] ref|NP_849468.1| cyclin-dependent kinase F-1 [Arabidopsis thaliana] sp|O80345.1|CDKF1_ARATH RecName: Full=Cyclin-dependent kinase F-1; Short=CDKF;1; AltName: Full=CDK-activating kinase 1-At; Short=CAK1-At 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinase f-1 0.0
N-terminus
biog3_v1.0_unigene23541 biogeco3 v1.0 300
AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 1.99965e-42
FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
biog3_v1.0_unigene23593 biogeco3 v1.0 313
AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
Blast2go: two-component response regulator-like aprr1-like 0.0
unknown
biog3_v1.0_unigene23602 biogeco3 v1.0 193
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
Blast2go: histone h3 0.0
unknown
biog3_v1.0_unigene23605 biogeco3 v1.0 372
AutoFact: 5-hydroxyisourate hydrolase (Fragment) n=2 Tax=Vitis vinifera RepID=D7T3Z8_VITVI 0.0
FL-Next: Isoform 3 of Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL 0.0
Blast2go: 5-hydroxyisourate hydrolase 0.0
C-terminus
biog3_v1.0_unigene23613 biogeco3 v1.0 341
AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adagio protein 1 0.0
Putative N-terminus
biog3_v1.0_unigene23622 biogeco3 v1.0 255
AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO 0.0
FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serrate rna effector molecule-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain