Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1365 biogeco3 v1.0 427
AutoFact: origin recognition complex subunit 4 [Zea mays] gb|AAL10455.1|AF417484_1 origin recognition complex subunit 4 [Zea mays] 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: origin recognition complex subunit 4 1.43104e-22
Putative N-terminus
biog3_v1.0_unigene1378 biogeco3 v1.0 387
AutoFact: SNARE-interacting protein KEULE n=4 Tax=Andropogoneae RepID=B6SHD7_MAIZE 0.0
FL-Next: sp=Probable protein transport Sec1a; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: snare-interacting protein keule 0.0
Internal
biog3_v1.0_unigene1383 biogeco3 v1.0 320
AutoFact: putative valyl-tRNA synthetase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Valyl-tRNA synthetase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: valyl-trna synthetase-like 0.0
Internal
biog3_v1.0_unigene1397 biogeco3 v1.0 762
AutoFact: Golgi-localized protein GRIP [Arabidopsis thaliana] 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein grip 0.0
C-terminus
biog3_v1.0_unigene1400 biogeco3 v1.0 262
AutoFact: Cell division cycle protein 14 (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8I465_CHLRE 0.0
Blast2go: cdc14b protein 0.0
unknown
biog3_v1.0_unigene1419 biogeco3 v1.0 926
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene1422 biogeco3 v1.0 1021
AutoFact: protein defective in meristem silencing 3 [Arabidopsis thaliana] gb|AAK83630.1| AT3g49250/F2K15_110 [Arabidopsis thaliana] gb|AAL90947.1| AT3g49250/F2K15_110 [Arabidopsis thaliana] gb|AEE78515.1| protein defective in meristem silencing 3 [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene1425 biogeco3 v1.0 341
AutoFact: [R] COG2319 FOG: WD40 repeat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fy 0.0
Internal
biog3_v1.0_unigene1431 biogeco3 v1.0 518
AutoFact: poly(A) polymerase 1 [Arabidopsis thaliana] gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis thaliana gb|AF255297 and contains a Nucleotidyltransferase PF|01909 domain. ESTs gb|AV536592, gb|AV553256, gb|AV561630, 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
Internal
biog3_v1.0_unigene1440 biogeco3 v1.0 892
AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
FL-Next: sp=Adagio-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: adagio protein 1 0.0
C-terminus
biog3_v1.0_unigene1465 biogeco3 v1.0 819
AutoFact: smad nuclear-interacting protein 1 [Arabidopsis thaliana] sp|Q8W4D8.1|DDL_ARATH RecName: Full=FHA domain-containing protein DDL; AltName: Full=Protein DAWDLE gb|AAL32704.1| Unknown protein [Arabidopsis thaliana] gb|AAN15324.1| Unknown protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fha domain-containing protein ddl 0.0
C-terminus
biog3_v1.0_unigene1471 biogeco3 v1.0 780
AutoFact: vacuolar membrane ATPase subunit c'' [Citrus limon] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar atp synthase 21 kda proteolipid subunit 0.0
Complete
biog3_v1.0_unigene1481 biogeco3 v1.0 956
AutoFact: ADP-ribosylation factor GTPase-activating protein AGD3 [Arabidopsis thaliana] sp|Q5W7F2.1|AGD3_ARATH RecName: Full=ADP-ribosylation factor GTPase-activating protein AGD3; Short=ARF GAP AGD3; AltName: Full=Protein ARF-GAP DOMAIN 3; Short=AtAGD3; AltName: F 0.0
FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: adp-ribosylation factor gtpase-activating protein agd3 0.0
Putative C-terminus
biog3_v1.0_unigene1552 biogeco3 v1.0 1621
AutoFact: 26S protease regulatory subunit 6B homolog n=13 Tax=Embryophyta RepID=PRS6B_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene1558 biogeco3 v1.0 416
AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene1584 biogeco3 v1.0 481
AutoFact: WS0383.C21_J13 SS-B-23 Picea sitchensis cDNA clone WS0383_J13 3', mRNA sequence. 0.0
FL-Next: sp=Nuclear cap-binding protein subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: nuclear cap-binding protein 0.0
Internal
biog3_v1.0_unigene1617 biogeco3 v1.0 572
AutoFact: Brushy protein, putative n=1 Tax=Ricinus communis RepID=B9RTZ8_RICCO 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein brushy 1.4013e-45
N-terminus
biog3_v1.0_unigene1640 biogeco3 v1.0 1357
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box lrr-repeat protein 15-like 0.0
Complete
biog3_v1.0_unigene1652 biogeco3 v1.0 306
AutoFact: thioredoxin [Limonium bicolor] 0.0
Blast2go: thioredoxin chloroplastic-like 0.0
unknown
biog3_v1.0_unigene1658 biogeco3 v1.0 1494
AutoFact: Glutamyl-tRNA synthetase 1, 2, putative n=1 Tax=Ricinus communis RepID=B9T2L7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamyl-trna synthetase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain