Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene314 biogeco3 v1.0 347
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5A8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable inactive receptor kinase at5g58300-like 0.0
Internal
biog3_v1.0_unigene341 biogeco3 v1.0 492
• AutoFact: pfam04739, AMPKBI, 5'-AMP-activated protein kinase beta subunit, interation domain 8.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf1-related protein kinase regulatory subunit beta-2 0.0
N-terminus
biog3_v1.0_unigene347 biogeco3 v1.0 283
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleosome chromatin assembly factor group 0.0
Putative N-terminus
biog3_v1.0_unigene358 biogeco3 v1.0 484
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9S2S7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: btb poz domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene361 biogeco3 v1.0 269
• AutoFact: [R] COG2319 FOG: WD40 repeat 0.0
• Blast2go: flowering time control protein fy 0.0
unknown
biog3_v1.0_unigene389 biogeco3 v1.0 787
• AutoFact: Riboflavin kinase/fmn adenylyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SFB1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene395 biogeco3 v1.0 390
• AutoFact: PREDICTED: similar to F-box-containing protein 2 n=2 Tax=Vitis vinifera RepID=UPI000198358B 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box protein skip16 0.0
C-terminus
biog3_v1.0_unigene423 biogeco3 v1.0 1159
• AutoFact: 40S ribosomal S4 protein [Glycine max] gb|ACU21252.1| unknown [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
biog3_v1.0_unigene447 biogeco3 v1.0 656
• AutoFact: Heat shock protein 90-1 n=9 Tax=rosids RepID=HS901_ARATH 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Blast2go: heat shock protein 81-1 0.0
Internal
biog3_v1.0_unigene456 biogeco3 v1.0 434
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5V6_RICCO 0.0
• FL-Next: sp=Receptor-like serine/threonine-protein kinase ALE2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: receptor-like serine threonine-protein kinase ale2-like 0.0
Internal
biog3_v1.0_unigene470 biogeco3 v1.0 419
• AutoFact: diacylglycerol kinase [Arabidopsis thaliana] 0.0
• FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: diacylglycerol kinase 0.0
C-terminus
biog3_v1.0_unigene487 biogeco3 v1.0 248
• AutoFact: RecName: Full=Protein HIRA; AltName: Full=Histone regulator protein emb|CAB88535.1| WD repeat domain protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Protein HIRA; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein hira 0.0
Internal
biog3_v1.0_unigene504 biogeco3 v1.0 978
• AutoFact: Acyl-CoA synthetase [Ricinus communis] gb|ABC02881.1| ACS2 [Ricinus communis] gb|EEF45375.1| Acyl-CoA synthetase [Ricinus communis] 0.0
• FL-Next: sp=Long chain acyl-CoA synthetase 6, peroxisomal; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: annotation was added to scaffolds in november 2011~long chain fatty acid- ligase 0.0
N-terminus
biog3_v1.0_unigene505 biogeco3 v1.0 497
• AutoFact: BTB/POZ; MATH [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: speckle-type poz protein 0.0
C-terminus
biog3_v1.0_unigene515 biogeco3 v1.0 851
• AutoFact: Inner membrane protein ALBINO3, chloroplastic n=4 Tax=Arabidopsis RepID=ALB3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: inner membrane protein albino3 0.0
Putative N-terminus
biog3_v1.0_unigene519 biogeco3 v1.0 359
• AutoFact: Peroxiredoxin, putative n=1 Tax=Ricinus communis RepID=B9SRG0_RICCO 6.0e-30
• Blast2go: protein 7.07514e-35
unknown
biog3_v1.0_unigene540 biogeco3 v1.0 263
• AutoFact: Coronatine-insensitive protein, putative n=1 Tax=Ricinus communis RepID=B9SWQ0_RICCO 0.0
• Blast2go: coronitine insensitive 1 0.0
unknown
biog3_v1.0_unigene543 biogeco3 v1.0 393
• AutoFact: protein ALWAYS EARLY 3 [Arabidopsis thaliana] sp|Q6A332.1|ALY3_ARATH RecName: Full=Protein ALWAYS EARLY 3; Short=AtALY3 emb|CAE47462.1| always early protein 3 [Arabidopsis thaliana] gb|AEE76508.1| protein ALWAYS EARLY 3 [Arabidopsis thaliana] 1.0e-12
• Blast2go: lin-9-like protein 8.21308e-16
unknown
biog3_v1.0_unigene556 biogeco3 v1.0 1460
• AutoFact: MAP kinase n=1 Tax=Selaginella moellendorffii RepID=D8SYB3_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mitogen-activated protein kinase kinase 6 0.0
Complete
biog3_v1.0_unigene568 biogeco3 v1.0 332
• AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atpase splayed 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain