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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene5313 biogeco3 v1.0 288
AutoFact: secE/sec61-gamma protein transport protein [Arabidopsis thaliana] emb|CAB10266.1| hypothetical protein [Arabidopsis thaliana] emb|CAB78529.1| hypothetical protein [Arabidopsis thaliana] gb|AAK76501.1| unknown protein [Arabidopsis thaliana] gb|AAM20124.1| 4.0e-17
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene5339 biogeco3 v1.0 1763
AutoFact: Calcium-dependent protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCK2_RICCO 0.0
FL-Next: sp=Calcium-dependent protein kinase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: calcium-dependent protein kinase 0.0
Complete
biog3_v1.0_unigene5359 biogeco3 v1.0 1584
AutoFact: Pseudotzain n=3 Tax=Pinaceae RepID=Q40922_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine proteinase rd21a 0.0
C-terminus
biog3_v1.0_unigene5367 biogeco3 v1.0 463
AutoFact: pfam02296, Alpha_adaptin_C, Alpha adaptin AP2, C-terminal domain 8.0e-16
FL-Next: sp=AP-2 complex subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap-2 complex subunit alpha-1 0.0
Internal
biog3_v1.0_unigene5418 biogeco3 v1.0 431
AutoFact: protein TIFY 8 [Arabidopsis thaliana] sp|Q84MB2.1|TIF8_ARATH RecName: Full=Protein TIFY 8 gb|AAP21239.1| At4g32570 [Arabidopsis thaliana] gb|AEE86081.1| protein TIFY 8 [Arabidopsis thaliana] 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene5433 biogeco3 v1.0 424
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene5467 biogeco3 v1.0 767
AutoFact: putative alanine aminotransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alanine aminotransferase 0.0
N-terminus
biog3_v1.0_unigene5499 biogeco3 v1.0 699
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAU94425.1| At1g65030 [Arabidopsis thaliana] gb|AEE34317.1| WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p21-activated protein kinase-interacting protein 1-like 0.0
Putative N-terminus
biog3_v1.0_unigene5506 biogeco3 v1.0 381
AutoFact: Ubiquitin-activating enzyme E1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T3V0_PHYPA 0.0
FL-Next: sp=Ubiquitin-activating enzyme E1 2; Triticum aestivum (Wheat). 0.0
Blast2go: ubiquitin-activating enzyme e1 0.0
Internal
biog3_v1.0_unigene5542 biogeco3 v1.0 495
AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TR00_VITVI 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 25; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 25-like 0.0
Internal
biog3_v1.0_unigene5557 biogeco3 v1.0 701
AutoFact: origin of replication complex 1B [Arabidopsis thaliana] emb|CAB53755.1| origin recognition complex subunit 1-like protein [Arabidopsis thaliana] emb|CAB78305.1| origin recognition complex subunit 1-like protein [Arabidopsis thaliana] emb|CAD20132.1| origi 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: origin recognition complex subunit 1-like 0.0
Internal
biog3_v1.0_unigene5570 biogeco3 v1.0 736
AutoFact: smad nuclear-interacting protein 1 [Arabidopsis thaliana] sp|Q8W4D8.1|DDL_ARATH RecName: Full=FHA domain-containing protein DDL; AltName: Full=Protein DAWDLE gb|AAL32704.1| Unknown protein [Arabidopsis thaliana] gb|AAN15324.1| Unknown protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fha domain-containing protein ddl 0.0
Internal
biog3_v1.0_unigene5578 biogeco3 v1.0 1241
AutoFact: Bax inhibitor 1 n=1 Tax=Nicotiana tabacum RepID=Q93XB9_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bax inhibitor 1 0.0
Complete
biog3_v1.0_unigene5595 biogeco3 v1.0 593
AutoFact: CBL-interacting protein kinase 03 n=2 Tax=Selaginella moellendorffii RepID=C4P7R5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene5630 biogeco3 v1.0 1673
AutoFact: pfam01425, Amidase, Amidase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amidase family protein 0.0
C-terminus
biog3_v1.0_unigene5638 biogeco3 v1.0 402
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: integrin-linked protein kinase family protein 0.0
Internal
biog3_v1.0_unigene5655 biogeco3 v1.0 391
AutoFact: Inward rectifying shaker-like K+ channel n=4 Tax=Vitis vinifera RepID=D0R6Q1_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 0.0
Internal
biog3_v1.0_unigene5662 biogeco3 v1.0 761
AutoFact: Phosphatidylinositol-4-phosphate 5-kinase, putative n=1 Tax=Ricinus communis RepID=B9S0D1_RICCO 0.0
FL-Next: sp=Phosphatidylinositol-4-phosphate 5-kinase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphatidylinositol-4-phosphate 5-kinase 9 0.0
Internal
biog3_v1.0_unigene5695 biogeco3 v1.0 744
AutoFact: Unassigned protein
FL-Next: sp=VHS domain-containing protein At3g16270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vhs domain-containing protein at3g16270-like 0.0
Internal
biog3_v1.0_unigene5716 biogeco3 v1.0 2790
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: sp=Cell division control protein 48 homolog D; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cell division cycle protein 48 homolog 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain