Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene3213 biogeco3 v1.0 818
AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana] 9.99967e-42
Blast2go: protein arginine serine-rich 45 0.0
Coding
biog3_v1.0_unigene3233 biogeco3 v1.0 469
AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene3259 biogeco3 v1.0 1770
AutoFact: Aldose 1-epimerase, putative n=1 Tax=Ricinus communis RepID=B9S6E7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aldose 1-epimerase family protein 0.0
Complete
biog3_v1.0_unigene3278 biogeco3 v1.0 332
AutoFact: Ku70 homolog [Populus nigra] 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku70 0.0
unknown
biog3_v1.0_unigene3285 biogeco3 v1.0 425
AutoFact: 40S ribosomal S4 protein [Glycine max] gb|ACU21252.1| unknown [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s4 0.0
C-terminus
biog3_v1.0_unigene3286 biogeco3 v1.0 606
AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9SCQ6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450-like protein 0.0
C-terminus
biog3_v1.0_unigene3317 biogeco3 v1.0 705
AutoFact: splicing factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp31-like 0.0
Complete
biog3_v1.0_unigene3324 biogeco3 v1.0 463
AutoFact: putative LRR receptor-like serine/threonine-protein kinase RKF3 [Arabidopsis thaliana] sp|P93050.1|RKF3_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase RKF3; AltName: Full=Receptor-like kinase in flowers 3; Flags: Precursor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase rkf3-like 0.0
Internal
biog3_v1.0_unigene3379 biogeco3 v1.0 2528
AutoFact: cleavage and polyadenylation specificity factor subunit 2 [Arabidopsis thaliana] sp|Q9LKF9.2|CPSF2_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cleavage and polyadenylation specificity factor 0.0
C-terminus
biog3_v1.0_unigene3392 biogeco3 v1.0 491
AutoFact: Putative anaphase promoting complex protein, identical [Solanum demissum] 0.0
FL-Next: sp=Anaphase-promoting complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: anaphase-promoting complex subunit 2-like 0.0
Internal
biog3_v1.0_unigene3405 biogeco3 v1.0 307
AutoFact: nudix hydrolase 3 [Arabidopsis thaliana] sp|Q8L831.1|NUDT3_ARATH RecName: Full=Nudix hydrolase 3; Short=AtNUDT3 gb|AAM53332.1| unknown protein [Arabidopsis thaliana] gb|AAN15461.1| unknown protein [Arabidopsis thaliana] gb|AEE36287.1| nudix hydrolase 3 [A 0.0
FL-Next: sp=Nudix hydrolase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nudix hydrolase 3-like 0.0
Internal
biog3_v1.0_unigene3411 biogeco3 v1.0 441
AutoFact: GroES-like zinc-binding alcohol dehydrogenase-like protein [Arabidopsis thaliana] emb|CAB88049.1| quinone reductase-like protein [Arabidopsis thaliana] gb|AAN41337.1| putative quinone reductase [Arabidopsis thaliana] dbj|BAD94498.1| quinone reductase-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: quinone oxidoreductase-like protein 2 homolog 0.0
Internal
biog3_v1.0_unigene3416 biogeco3 v1.0 207
AutoFact: cyclin H-1 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Cyclin-H1-1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cyclin h-1 0.0
Internal
biog3_v1.0_unigene3421 biogeco3 v1.0 685
AutoFact: protein TWIN LOV 1 [Arabidopsis thaliana] dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis thaliana] gb|AEC05613.1| protein TWIN LOV 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein twin lov 1 0.0
N-terminus
biog3_v1.0_unigene3436 biogeco3 v1.0 757
AutoFact: leucine-rich repeat transmembrane protein kinase family protein [Arabidopsis thaliana] sp|Q9M9C5.1|Y1680_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g68400; Flags: Precursor gb|AAF26042.1|AC015986_5 putative receptor k 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at1g68400-like 0.0
C-terminus
biog3_v1.0_unigene3455 biogeco3 v1.0 425
AutoFact: putative protein kinase (AME2/AFC1) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene3496 biogeco3 v1.0 449
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Selaginella moellendorffii RepID=D8REC4_SELML 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 11-like 0.0
C-terminus
biog3_v1.0_unigene3522 biogeco3 v1.0 815
AutoFact: PREDICTED: similar to Late histone H2A.2.2 n=2 Tax=Hydra magnipapillata RepID=UPI0001924B8D 3.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
biog3_v1.0_unigene3525 biogeco3 v1.0 355
AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gras family transcription factor 0.0
Putative N-terminus
biog3_v1.0_unigene3532 biogeco3 v1.0 416
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain