|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene19951
|
biogeco3 v1.0
|
255
|
|
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAE44475.1| WD repeat protein [Arabidopsis thaliana] gb|AEE85686.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
|
6.0e-37
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: guanine nucleotide-binding protein subunit beta-like protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20123
|
biogeco3 v1.0
|
223
|
|
• AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD
|
0.0
|
|
• Blast2go: coatomer alpha
|
0.0
|
|
Putative coding
|
|
biog3_v1.0_unigene20739
|
biogeco3 v1.0
|
342
|
|
• AutoFact: similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Os02g0513700 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: wd-repeat membrane protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20836
|
biogeco3 v1.0
|
146
|
|
• AutoFact: similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana]
|
0.0
|
|
• Blast2go: wd-repeat membrane protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene21372
|
biogeco3 v1.0
|
232
|
|
• AutoFact: cullin 4 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=Cullin-4; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: ubiquitin-protein cullin 4
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene22059
|
biogeco3 v1.0
|
258
|
|
• AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar
|
0.0
|
|
• FL-Next: sp=Regulatory-associated protein of TOR 2; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: regulatory-associated protein of tor 1-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene22430
|
biogeco3 v1.0
|
229
|
|
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01754.1| putative protein [Arabidopsis thaliana] gb|AAL36367.1| unknown protein [Arabidopsis thaliana] gb|AAM14196.1| unknown protein [Arabidopsis thaliana] gb|AED92176.1| transducin/
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: ribosome biogenesis protein wdr12 homolog
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene22638
|
biogeco3 v1.0
|
400
|
|
• AutoFact: DNA damage-binding protein 1a n=5 Tax=Brassicaceae RepID=DDB1A_ARATH
|
0.0
|
|
• FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: uv damaged dna binding protein 1
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene23119
|
biogeco3 v1.0
|
188
|
|
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAE44475.1| WD repeat protein [Arabidopsis thaliana] gb|AEE85686.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene23434
|
biogeco3 v1.0
|
172
|
|
• AutoFact: Prp8 binding protein [Arabidopsis thaliana] gb|AAB64029.1| putative splicing factor [Arabidopsis thaliana] gb|AAM13181.1| putative splicing factor [Arabidopsis thaliana] gb|AAP68267.1| At2g43770 [Arabidopsis thaliana] gb|AEC10322.1| Prp8 binding protein [
|
0.0
|
|
• Blast2go: u5 small nuclear ribonucleoprotein 40 kda
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene23645
|
biogeco3 v1.0
|
326
|
|
• AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAC27402.2| expressed protein [Arabidopsis thaliana] gb|AAM65204.1| unknown [Arabidopsis thaliana] dbj|BAC42145.1| unknown protein [Arabidopsis thaliana] gb|AAO63858.1| putative G-protei
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: wd repeat-containing protein 55-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene23672
|
biogeco3 v1.0
|
285
|
|
• AutoFact: RNA export 1 [Nicotiana benthamiana]
|
0.0
|
|
• Blast2go: rae1-like protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene23975
|
biogeco3 v1.0
|
300
|
|
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO
|
0.0
|
|
• FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
|
0.0
|
|
• Blast2go: dna damage-binding protein 1a
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene24041
|
biogeco3 v1.0
|
343
|
|
• AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus]
|
0.0
|
|
• FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene24244
|
biogeco3 v1.0
|
348
|
|
• AutoFact: LisH domain containing protein
|
4.0e-05
|
|
• FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: ddb1- and cul4-associated factor homolog 1-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene25456
|
biogeco3 v1.0
|
313
|
|
• AutoFact: WD-40 repeat protein [Solanum lycopersicum]
|
0.0
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: wd40 repeat-containing protein smu1
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene25755
|
biogeco3 v1.0
|
423
|
|
• AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD
|
0.0
|
|
• FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: coatomer alpha
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene26182
|
biogeco3 v1.0
|
279
|
|
• AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD
|
0.0
|
|
• FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: coatomer alpha
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene26357
|
biogeco3 v1.0
|
197
|
|
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida).
|
0.0
|
|
• Blast2go: ddb1- and cul4-associated factor 8-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene26381
|
biogeco3 v1.0
|
234
|
|
• AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] ref|NP_850516.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL07141.1| unknown protein [Arabidopsis thaliana] gb|AAM83246.1| AT3g05090/T12H1_5 [Arabidopsis thalia
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: wd repeat-containing protein 48-like
|
0.0
|
|
Internal
|
