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Assembly Name: biogeco3 v1.0

Name: plastid

Term: GO:0009536  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene24182 biogeco3 v1.0 286
• AutoFact: Herpes_gp2 multi-domain protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene24213 biogeco3 v1.0 241
• AutoFact: C2 domain containing protein 6.0e-10
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: armadillo beta-catenin-like repeat and c2 domain-containing protein 0.0
Internal
biog3_v1.0_unigene24259 biogeco3 v1.0 212
• AutoFact: Protein phosphatase 2C n=1 Tax=Zea mays RepID=B6U2F2_MAIZE 0.0
• Blast2go: protein phosphatase 2c containing expressed 0.0
Putative coding
biog3_v1.0_unigene24270 biogeco3 v1.0 342
• AutoFact: Adenylyl-sulfate kinase n=1 Tax=Picea sitchensis RepID=B8LKL6_PICSI 0.0
• FL-Next: sp=Adenylyl-sulfate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adenylyl-sulfate kinase chloroplastic-like 0.0
N-terminus
biog3_v1.0_unigene24368 biogeco3 v1.0 253
• AutoFact: DUF677 domain containing protein 3.0e-26
• FL-Next: sp=Putative UPF0496 protein 5; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: upf0496 protein at4g34320-like 1.97218e-33
Internal
biog3_v1.0_unigene24396 biogeco3 v1.0 181
• AutoFact: Unassigned protein
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene24436 biogeco3 v1.0 81
• AutoFact: gametophytic factor 2 [Arabidopsis thaliana] dbj|BAC43188.1| putative DnaJ protein [Arabidopsis thaliana] gb|AED95612.1| gametophytic factor 2 [Arabidopsis thaliana] 0.0
• Blast2go: chaperone protein dnaj mitochondrial-like 0.0
unknown
biog3_v1.0_unigene24482 biogeco3 v1.0 268
• AutoFact: nucleic acid binding protein1 [Zea mays] gb|AAA33486.1| nucleic acid-binding protein [Zea mays] gb|ACG38158.1| ribonucleoprotein [Zea mays] gb|ACL52389.1| unknown [Zea mays] 0.0
• Blast2go: 31 kda chloroplastic-like 0.0
unknown
biog3_v1.0_unigene24622 biogeco3 v1.0 279
• AutoFact: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana] gb|AAP04148.1| unknown protein [Arabidopsis thaliana] dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75129.1| Cleavage and polyadenylation s 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: cleavage and polyadenylation specificity factor a subunit protein 0.0
Internal
biog3_v1.0_unigene24705 biogeco3 v1.0 540
• AutoFact: alkaline-phosphatase-like protein [Arabidopsis thaliana] emb|CAB45328.1| nucleotide pyrophosphatase-like protein [Arabidopsis thaliana] emb|CAB79726.1| nucleotide pyrophosphatase-like protein [Arabidopsis thaliana] dbj|BAH30545.1| hypothetical protein [Ar 0.0
• FL-Next: tr=Ectonucleotide pyrophosphatase/phosphodiesterase, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: ectonucleotide pyrophosphatase phosphodiesterase family member 0.0
N-terminus
biog3_v1.0_unigene24799 biogeco3 v1.0 395
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene24841 biogeco3 v1.0 281
• AutoFact: thioredoxin [Limonium bicolor] 0.0
• Blast2go: thioredoxin chloroplastic-like 0.0
unknown
biog3_v1.0_unigene24901 biogeco3 v1.0 215
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_818.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TRX8_VITVI 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor 3b subunit 2-like 0.0
Putative C-terminus
biog3_v1.0_unigene24980 biogeco3 v1.0 326
• AutoFact: DUF2343 domain containing protein 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
N-terminus
biog3_v1.0_unigene25053 biogeco3 v1.0 398
• AutoFact: tryptophan synthase beta chain [Arabidopsis thaliana] dbj|BAB10143.1| tryptophan synthase beta chain [Arabidopsis thaliana] gb|AAL91238.1| tryptophan synthase beta chain [Arabidopsis thaliana] gb|AAN15574.1| tryptophan synthase beta chain [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tryptophan synthase beta chain 0.0
Internal
biog3_v1.0_unigene25059 biogeco3 v1.0 427
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rhodanese homology domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene25189 biogeco3 v1.0 180
• AutoFact: Monoglyceride lipase isoform 2-like n=2 Tax=Oryza sativa RepID=Q4VWY7_ORYSJ 0.0
• Blast2go: monoglyceride lipase 0.0
unknown
biog3_v1.0_unigene25216 biogeco3 v1.0 215
• AutoFact: Chloroplast lipocalin n=2 Tax=Andropogoneae RepID=Q38JB7_SORBI 0.0
• Blast2go: chloroplast lipocalin 0.0
unknown
biog3_v1.0_unigene25229 biogeco3 v1.0 79
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene25251 biogeco3 v1.0 411
• AutoFact: CRT (chloroquine-resistance transporter)-like transporter 3 [Arabidopsis thaliana] gb|AAM13018.1| unknown protein [Arabidopsis thaliana] gb|AAM91339.1| unknown protein [Arabidopsis thaliana] dbj|BAD44200.1| unnamed protein product [Arabidopsis thaliana] g 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: crt homolog 1-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain