Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: plastid

Term: GO:0009536  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene10557 biogeco3 v1.0 567
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
Blast2go: protein 0.0
Putative coding
biog3_v1.0_unigene10566 biogeco3 v1.0 734
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] dbj|BAB02197.1| unnamed protein product [Arabidopsis thaliana] dbj|BAE98825.1| hypothetical protein [Arabidopsis thaliana] gb|AEE77150.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Internal
biog3_v1.0_unigene10692 biogeco3 v1.0 2676
AutoFact: putative transketolase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transketolase 0.0
Complete
biog3_v1.0_unigene10709 biogeco3 v1.0 523
AutoFact: Monoglyceride lipase isoform 2-like n=2 Tax=Oryza sativa RepID=Q4VWY7_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: monoglyceride lipase 0.0
C-terminus
biog3_v1.0_unigene10737 biogeco3 v1.0 767
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gb|AAC79107.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77784.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82257.1| Mitochondrial transcription terminat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
Internal
biog3_v1.0_unigene10871 biogeco3 v1.0 1046
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene10922 biogeco3 v1.0 1502
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans regia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bifunctional 3-dehydroquinate dehydratase shikimate chloroplastic-like 0.0
C-terminus
biog3_v1.0_unigene11061 biogeco3 v1.0 2022
AutoFact: Chaperonin CPN60-1, mitochondrial n=3 Tax=rosids RepID=CH61_CUCMA 0.0
FL-Next: sp=Chaperonin CPN60-2, mitochondrial; Cucurbita maxima (Pumpkin) (Winter squash). 0.0
Blast2go: chaperonin cpn60- mitochondrial-like isoform 1 0.0
Complete
biog3_v1.0_unigene11063 biogeco3 v1.0 704
AutoFact: TraB-like protein [Arabidopsis thaliana] dbj|BAC42600.1| unknown protein [Arabidopsis thaliana] gb|AAO63387.1| At1g05270 [Arabidopsis thaliana] dbj|BAD43499.1| unknown protein [Arabidopsis thaliana] gb|AEE27816.1| TraB-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene11089 biogeco3 v1.0 1080
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_52.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SQF8_VITVI 0.0
FL-Next: sp=Choline monooxygenase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: choline monooxygenase 0.0
Putative C-terminus
biog3_v1.0_unigene11178 biogeco3 v1.0 992
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=3 Tax=Pinaceae RepID=A7LA01_PICAB 0.0
FL-Next: tr=1-deoxy-D-xylulose 5-phosphate synthase type II; Pinus taeda (Loblolly pine). 0.0
Blast2go: 1-deoxyxylulose 5-phosphate synthase 0.0
Internal
biog3_v1.0_unigene11179 biogeco3 v1.0 757
AutoFact: ATP-binding cassette transporter, subfamily F, member 7 protein PpABCF7 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SVQ4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family protein 0.0
C-terminus
biog3_v1.0_unigene11192 biogeco3 v1.0 691
AutoFact: SEUSS transcriptional co-regulator [Arabidopsis thaliana] ref|NP_001117434.1| SEUSS transcriptional co-regulator [Arabidopsis thaliana] sp|Q8W234.1|SEUSS_ARATH RecName: Full=Transcriptional corepressor SEUSS gb|AAL57277.1| SEUSS transcriptional co-regulat 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: seuss transcriptional co-regulator 0.0
C-terminus
biog3_v1.0_unigene11219 biogeco3 v1.0 545
AutoFact: DUF1637 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-aminoethanethiol dioxygenase-like 0.0
N-terminus
biog3_v1.0_unigene11224 biogeco3 v1.0 621
AutoFact: Phosphoenolpyruvate/phosphate translocator 1, chloroplastic n=2 Tax=Oryza sativa RepID=PPT1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: triose phosphate phosphate non-green precursor 0.0
Putative N-terminus
biog3_v1.0_unigene11249 biogeco3 v1.0 925
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9S6L1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at5g21040-like protein 0.0
Putative C-terminus
biog3_v1.0_unigene11273 biogeco3 v1.0 734
AutoFact: dolichyl-diphosphooligosaccharide--protein glycosyltransferase [Arabidopsis thaliana] gb|AAG12524.1|AC015446_5 Putative integral membrane protein [Arabidopsis thaliana] gb|AEE31675.1| dolichyl-diphosphooligosaccharide--protein glycosyltransferase [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene11275 biogeco3 v1.0 665
AutoFact: Phototropic-responsive NPH3 protein [Arabidopsis thaliana] sp|Q9FKB6.1|Y5880_ARATH RecName: Full=BTB/POZ domain-containing protein At5g48800 dbj|BAB09433.1| non-phototropic hypocotyl-like protein [Arabidopsis thaliana] gb|AED95726.1| Phototropic-responsiv 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phototropic-responsive nph3 family protein 0.0
Internal
biog3_v1.0_unigene11348 biogeco3 v1.0 849
AutoFact: PLE, putative n=1 Tax=Ricinus communis RepID=B9S7E4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule-associated protein 65-7 0.0
N-terminus
biog3_v1.0_unigene11390 biogeco3 v1.0 500
AutoFact: acyltransferase-like protein [Arabidopsis thaliana] sp|Q9ZVN2.1|Y1457_ARATH RecName: Full=Acyltransferase-like protein At1g54570, chloroplastic; Flags: Precursor gb|AAC64874.1| Contains similarity to gi|2924495 hypothetical protein Rv1920 from Mycobacteri 0.0
FL-Next: sp=Acyltransferase-like protein At3g26840, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain