Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: plastid

Term: GO:0009536  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene7510 biogeco3 v1.0 314
AutoFact: Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] gb|AAL86337.1| unknown protein [Arabidopsis thaliana] gb|AAM63948.1| unknown [Arabidopsis thaliana] gb|AAM67572.1| unknown protein [Arabidopsis thaliana] gb|AEE80255 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene7547 biogeco3 v1.0 992
AutoFact: pre-mRNA-splicing factor SYF2 [Arabidopsis thaliana] gb|AAC64217.2| Expressed protein [Arabidopsis thaliana] gb|AAM15083.1| Expressed protein [Arabidopsis thaliana] gb|AAM20452.1| unknown protein [Arabidopsis thaliana] gb|AAM91242.1| unknown protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gcip-interacting family 0.0
Putative N-terminus
biog3_v1.0_unigene7595 biogeco3 v1.0 1292
AutoFact: Tyrosyl-tRNA synthetase n=3 Tax=Zea mays RepID=B6T638_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tyrosyl-trna synthetase 0.0
C-terminus
biog3_v1.0_unigene7609 biogeco3 v1.0 779
AutoFact: metaxin-related protein [Arabidopsis thaliana] gb|AAD12026.1| expressed protein [Arabidopsis thaliana] gb|AAL50078.1| At2g19080/T20K24.9 [Arabidopsis thaliana] gb|AAM65186.1| unknown [Arabidopsis thaliana] gb|AAM98310.1| At2g19080/T20K24.9 [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene7682 biogeco3 v1.0 536
AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME 0.0
FL-Next: tr=tRNA pseudouridine synthase family protein; Cucumis melo subsp. melo. 0.0
Blast2go: trna pseudouridine synthase 0.0
Internal
biog3_v1.0_unigene7687 biogeco3 v1.0 1563
AutoFact: Patatin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: patatin-like phospholipase domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene7702 biogeco3 v1.0 292
AutoFact: Lariat debranching enzyme [Arabidopsis thaliana] sp|Q94K01.1|DBR1_ARATH RecName: Full=Lariat debranching enzyme; Short=AtDBR1 gb|AAK43876.1|AF370499_1 RNA lariat debranching enzyme - like protein [Arabidopsis thaliana] gb|ABI54338.1| At4g31770 [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lariat debranching enzyme 0.0
Internal
biog3_v1.0_unigene7716 biogeco3 v1.0 583
AutoFact: N-acetyl-glutamate synthase n=1 Tax=Solanum lycopersicum RepID=C4NFG1_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amino-acid acetyltransferase-like 0.0
N-terminus
biog3_v1.0_unigene7722 biogeco3 v1.0 947
AutoFact: hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] gb|AAK25929.1|AF360219_1 putative lipase [Arabidopsis thaliana] gb|AAK93696.1| putative lipase [Arabidopsis thaliana] gb|AED92248.1| hydrolase, alpha/beta fold family protein [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha beta fold family protein 0.0
Putative N-terminus
biog3_v1.0_unigene7735 biogeco3 v1.0 921
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S250_RICCO 0.0
FL-Next: sp=Interactor of constitutive active ROPs 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp binding 0.0
N-terminus
biog3_v1.0_unigene7755 biogeco3 v1.0 960
AutoFact: Protein-L-isoaspartate O-methyltransferase n=1 Tax=Picea sitchensis RepID=D5ADW3_PICSI 0.0
FL-Next: sp=Protein-L-isoaspartate O-methyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene7786 biogeco3 v1.0 433
AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQ20_VITVI 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 24 0.0
Internal
biog3_v1.0_unigene7812 biogeco3 v1.0 240
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gb|AAC79107.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77784.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82257.1| Mitochondrial transcription terminat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
Internal
biog3_v1.0_unigene7818 biogeco3 v1.0 516
AutoFact: Adenine/guanine permease AZG1 n=2 Tax=Arabidopsis RepID=AZG1_ARATH 0.0
FL-Next: sp=Adenine/guanine permease AZG1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: adenine guanine permease azg1-like 0.0
Internal
biog3_v1.0_unigene7833 biogeco3 v1.0 907
AutoFact: Transporter, putative n=1 Tax=Ricinus communis RepID=B9SAF5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene7837 biogeco3 v1.0 402
AutoFact: Pseudouridine synthase family protein [Arabidopsis thaliana] gb|AEE29970.1| Pseudouridine synthase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: trna pseudouridine synthase pus10-like 0.0
Putative Complete
biog3_v1.0_unigene7842 biogeco3 v1.0 297
AutoFact: RNA exonuclease, putative n=1 Tax=Ricinus communis RepID=B9RXA0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exonuclease-like protein 0.0
Putative C-terminus
biog3_v1.0_unigene7930 biogeco3 v1.0 332
AutoFact: phenylalanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q94K73.1|SYFM_ARATH RecName: Full=Phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial; AltName: Full=Phenylalanine--tRNA ligase; Short=PheRS; Flags: Precursor gb|AAK44062.1|AF370247_1 putative p 0.0
Blast2go: phenylalanyl-trna chloroplastic mitochondrial-like 0.0
unknown
biog3_v1.0_unigene7968 biogeco3 v1.0 358
AutoFact: 2-oxoglutarate-dependent dioxygenase family protein n=2 Tax=Arabidopsis thaliana RepID=Q9LJH2_ARATH 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: 2-oxoglutarate-dependent dioxygenase family protein 0.0
C-terminus
biog3_v1.0_unigene7973 biogeco3 v1.0 467
AutoFact: nuclear assembly factor 1 [Arabidopsis thaliana] gb|AAF86533.1|AC002560_26 F21B7.15 [Arabidopsis thaliana] gb|AEE27583.1| nuclear assembly factor 1 [Arabidopsis thaliana] 8.0e-38
Blast2go: protein 4.18988e-43
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain