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Welcome to Ruditapes DB

RuditapesDB is a transcriptome database for Clams (Ruditapes decussatus). This database includes the assemblies and annotation of new genomic resources generated from different tissues, developmental stages or stimuli treatments using NGS technologies. The information here provided represents a valuable information resource to boost research and aquaculture of these sole species. This database will be updated periodically with new transcriptomic information from NGS. Moreover, further studies for genome analysis and SNPs identification are ongoing.

Portada_ruditapes

Contact: Mmmail

Web interface: V1.2

Current Release:

Ruditapesdb DB v.1.0 2013-09-10

Software:
- SeqTrimNext v0.9a1
- BLAST+ v2.2.25+
- AutoFact v3.4 customised
- Full-LengtherNext
- Sma3
- GigaBayes
- mreps


HOW TO CITE
ruditapesDB: a database for Ruditapes spp genomic resources. Manuscript in preparation.

FUNDING SUPPORT





Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain